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Working with Structures
After pressing Convert, the process starts. As the conversion
finishes a green note appears at the bottom of the window
informing the user about successful conversion. The result JChem
for Excel file can be found in the previously defined directory. The
file will have the same name as the original one, but a "_JC4XL"
tag will be attached at the end.
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Working with Structures
If any error occurred during the conversion, these will be
summarized in a red coloured text at the bottom of the dialog.
Pressing the Details button, you can read the whole error message.
These functions of the converter tool are available as actions as
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Working with Structures
well, see the description in ConvertAccordToJC4XLAction,
ConvertChemDrawToJC4XLAction and ConvertISISToJC4XLAction
JChem for Excel File Converter Action
These Actions are described more in details in  
ConvertAccordToJC4XLAction, ConvertChemDrawToJC4XLAction and
ConvertISISToJC4XLAction subtopics in Actions  Reference topic of this
JChem for Excel File Converter Right-Click Menu Item
You can convert other file formats in JChem for Excel directly with
right-click menu item.
1. Opening the Accord, ChemDraw or ISIS for excel worksheet. 
2. Right-click somewhere on the worksheet and select the appropriate
file format to be converted:
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Working with Structures
3. After this step, the conversion process is similar to the one with
the ribbon action, the converted file can be saved with a specified
If the conversion processed successfully, an informing message
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Working with Structures
In Accord for Excel files structures and IDs will be converted to a
JCIDSYSStructure function, this way original IDs will be kept and will
be available for further application. All JChem for Excel functions and
features - including the structure handling - are available in the
newly generated (converted) file. The old Accord for Excel workbook
is kept without any changes.
Calculations  with  Third-Party  Services
In Marvin it is possible to integrate JAVA based local services or
different webservices via the MarvinSketch GUI, which can be opened
from JChem for Excel as well. This way you can include your own
calculation method to a single molecule if you have a .jar file, which
applies the appropriate method. You can find detailed description of
how to integrate this webservice here.
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Working with Structures
After  pressing Accept button, the custom service will be available in
Preferences  dialog.
Working with Structures
If you want to apply this custom service to a molecule available on
the sheet, you have to select Tools in Marvin Structure Editor
After selecting the custom service, another dialog opens with the
calculated  value. 
Open Structure Files
Open Structure Files
Since 6.2 version of JChem for Excel the Insert and Open
functionalities have been separated. With right-click menu item 
Insert structure you can insert structures from single or multiple
structure files, but only the first structure will be inserted into the
cell. The Open button in ribbon operates different. With this function
you can open the following basic file types:
·single structure files: the structure will be inserted into the current
active cell, in this case the Open function operates the same way
as the Insert structure function.
·multiple structure files: all the structures from the selected file will
be imported to the first column of an empty worksheet. The same
file formats are supported as in the case of Import from File.
·multiple structure files with data: all the structures with
corresponding data will be imported. The same fileformats are
supported as in the case of Import from File.
Open Multiple Structure Files with and without Data
1. Click the Open button in ribbon (it is available in Standard and
Advanced menus as well).
2. Open file dialog opens. Select a file containing multiple structures
(e.g. an SDFile) with or without data.
Open Structure Files
3. After pressing Open, a progress bar appears informing the user
about the status of the open process. 
4. All the structures available in the file will be displayed on a new
sheet, similar to the Import process, but the difference is that there
is no selection, field editing or filtering possibility, all structures with
all corresponding data will be displayed.
Open Structure Files
Open All Files in a Folder
After pressing the Open button in ribbon Open file dialog opens.
Scroll down to All  Files *.* option and select all files in a folder.
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