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PandocUser’sGuide
Pandoc’sMarkdown
Here is a footnote reference,[^1] and another.[^longnote]
[^1]: Here is the footnote.
[^longnote]: Here's one with multiple blocks.
Subsequent paragraphs are indented to show that they
belong to the previous footnote.
{ some.code }
The whole paragraph can be indented, or just the first
line. In this way, multi-paragraph footnotes work like
multi-paragraph list items.
This paragraph won't be part of the note, because it
isn't indented.
Theidentifiersinfootnotereferencesmaynotcontainspaces,tabs,ornewlines. Theseidentifiersare
usedonlytocorrelatethefootnotereferencewiththenoteitself;intheoutput,footnoteswillbenum-
beredsequentially.
Thefootnotesthemselvesneednotbeplacedattheendofthedocument. Theymayappearanywhere
exceptinsideotherblockelements(lists,blockquotes,tables,etc.).
Extension:inline_notes
Inline footnotesare alsoallowed(though, unlikeregularnotes, theycannot containmultiplepara-
graphs).Thesyntaxisasfollows:
Here is an inline note.^[Inlines notes are easier to write, since
you don't have to pick an identifier and move down to type the
note.]
Inlineandregularfootnotesmaybemixedfreely.
Citations
Extension:citations
Usinganexternalfilter,pandoc-citeproc,pandoccanautomaticallygeneratecitationsandabibliog-
raphyinanumberofstyles.Basicusageis
pandoc --filter pandoc-citeproc myinput.txt
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PandocUser’sGuide
Pandoc’sMarkdown
Inordertousethisfeature,youwillneedtospecifyabibliographyfileusingthebibliographymeta-
datafieldinaYAMLmetadatasection,or--bibliographycommandlineargument. Youcansupply
multiple--bibliographyargumentsorsetbibliographymetadatafieldtoYAMLarray,ifyouwant
tousemultiplebibliographyfiles.Thebibliographymayhaveanyoftheseformats:
Format
Fileextension
BibLaTeX
.bib
BibTeX
.bibtex
Copac
.copac
CSLJSON
.json
CSLYAML
.yaml
EndNote
.enl
EndNoteXML
.xml
ISI
.wos
MEDLINE
.medline
MODS
.mods
RIS
.ris
Notethat.bibcanbeusedwithbothBibTeXandBibLaTeXfiles;use.bibtextoforceBibTeX.
Notethatpandoc-citeproc --bib2jsonandpandoc-citeproc --bib2yamlcanproduce.jsonand
.yamlfilesfromanyofthesupportedformats.
In-field markup: In BibTeX and BibLaTeX databases, pandoc-citeproc parses asubset of LaTeX
markup; inCSLYAMLdatabases, pandocMarkdown; andinCSLJSONdatabases, anHTML-like
markup:
<i>...</i> italics
<b>...</b> bold
<span style="font-variant:small-caps;">...</span>or<sc>...</sc> smallcapitals
<sub>...</sub> subscript
<sup>...</sup> superscript
<span class="nocase">...</span> preventaphrasefrombeingcapitalizedastitlecase
pandoc-citeproc -jand-yinterconverttheCSLJSONandCSLYAMLformatsasfaraspossible.
Asanalternativetospecifyingabibliographyfileusing--bibliographyortheYAMLmetadatafield
bibliography,youcanincludethecitationdatadirectlyinthe referencesfieldofthedocument’s
YAMLmetadata.ThefieldshouldcontainanarrayofYAML-encodedreferences,forexample:
---
references:
- type: article-journal
id: WatsonCrick1953
author:
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PandocUser’sGuide
Pandoc’sMarkdown
- family: Watson
given: J. D.
- family: Crick
given: F. H. C.
issued:
date-parts:
- - 1953
- 4
- 25
title: 'Molecular structure of nucleic acids: a structure for deoxyribose
nucleic acid'
title-short: Molecular structure of nucleic acids
container-title: Nature
volume: 171
issue: 4356
page: 737-738
DOI: 10.1038/171737a0
URL: http://www.nature.com/nature/journal/v171/n4356/abs/171737a0.html
language: en-GB
...
(pandoc-citeproc --bib2yamlcanproducethesefromabibliographyfileinoneofthesupported
formats.)
CitationsandreferencescanbeformattedusinganystylesupportedbytheCitationStyleLanguage,
listedintheZoteroStyleRepository. Thesefilesarespecifiedusingthe--csloptionorthecslmeta-
datafield.Bydefault,pandoc-citeprocwillusetheChicagoManualofStyleauthor-dateformat.The
CSLprojectprovidesfurtherinformationonfindingandeditingstyles.
Tomakeyourcitationshyperlinkstothecorrespondingbibliographyentries,addlink-citations:
truetoyourYAMLmetadata.
Citationsgoinsidesquarebracketsandareseparatedbysemicolons. Eachcitationmusthaveakey,
composedof‘@’+thecitationidentifierfromthedatabase,andmayoptionallyhaveaprefix,alocator,
andasuffix. Thecitationkeymustbeginwithaletter,digit,or_,andmaycontainalphanumerics,_,
andinternalpunctuationcharacters(:.#$%&-+?<>~/).Herearesomeexamples:
Blah blah [see @doe99, pp. 33-35; also @smith04, chap. 1].
Blah blah [@doe99, pp. 33-35, 38-39 and *passim*].
Blah blah [@smith04; @doe99].
pandoc-citeprocdetectslocatortermsintheCSLlocalefiles. Eitherabbreviatedorunabbreviated
formsare accepted. Intheen-USlocale, locator termscanbewrittenineither singular orplural
forms, as bookbk./bks.chapterchap./chaps.columncol./cols.figurefig./figs.;
folio,fol./fols.;number,no./nos.;line,l./ll.;note,n./nn.;opus,op./opp.;page,p./pp.;
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PandocUser’sGuide
Pandoc’sMarkdown
paragraph,para./paras.;part,pt./pts.;section,sec./secs.;sub verbo,s.v./s.vv.;verse,
v./vv.;volume,vol./vols.;/¶¶;§/§§.Ifnolocatortermisused,“page”isassumed.
Aminussign(-)beforethe@willsuppressmentionoftheauthorinthecitation. Thiscanbeuseful
whentheauthorisalreadymentionedinthetext:
Smith says blah [-@smith04].
Youcanalsowriteanin-textcitation,asfollows:
@smith04 says blah.
@smith04 [p. 33] says blah.
Ifthestylecallsforalistofworkscited,itwillbeplacedattheendofthedocument.Normally,youwill
wanttoendyourdocumentwithanappropriateheader:
last paragraph...
# References
Thebibliographywillbeinsertedafterthisheader.Notethattheunnumberedclasswillbeaddedtothis
header,sothatthesectionwillnotbenumbered.
Ifyouwanttoincludeitemsinthebibliographywithoutactuallycitingtheminthebodytext,youcan
defineadummynocitemetadatafieldandputthecitationsthere:
---
nocite: |
@item1, @item2
...
@item3
Inthisexample,thedocumentwillcontainacitationforitem3only,butthebibliographywillcontain
entriesforitem1,item2,anditem3.
ForLaTeXorPDFoutput,youcanalsousenatbiborbiblatextorenderbibliography.Inordertodo
so,specifybibliographyfilesasoutlinedabove,andadd--natbibor--biblatexargumenttopandoc
invocation.Bearinmindthatbibliographyfileshavetobeinrespectiveformat(eitherBibTeXorBibLa-
TeX).
Formoreinformation,seethepandoc-citeprocmanpage.
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PandocUser’sGuide
Pandoc’sMarkdown
Non-pandocextensions
ThefollowingMarkdownsyntaxextensionsarenotenabledbydefaultinpandoc,butmaybeenabled
byadding+EXTENSIONtotheformatname,whereEXTENSIONisthenameoftheextension. Thus,for
example,markdown+hard_line_breaksisMarkdownwithhardlinebreaks.
Extension:lists_without_preceding_blankline
Allowalisttooccurrightafteraparagraph,withnointerveningblankspace.
Extension:hard_line_breaks
Causesallnewlineswithinaparagraphtobeinterpretedashardlinebreaksinsteadofspaces.
Extension:ignore_line_breaks
Causesnewlineswithinaparagraphtobeignored,ratherthanbeingtreatedasspacesorashardline
breaks. ThisoptionisintendedforusewithEastAsianlanguageswherespacesarenotusedbetween
words,buttextisdividedintolinesforreadability.
Extension:east_asian_line_breaks
Causesnewlineswithinaparagraphtobeignored, ratherthanbeingtreated asspacesorashard
linebreaks, whentheyoccurbetweentwoEastAsianwidecharacters. Thisisabetterchoicethan
ignore_line_breaksfortextsthatincludeamixofEastAsianwidecharactersandothercharacters.
Extension:emoji
Parsestextualemojislike:smile:asUnicodeemoticons.
Extension:tex_math_single_backslash
Causesanythingbetween\(and\)tobeinterpretedasinlineTeXmath,andanythingbetween\[
and\]tobeinterpretedasdisplayTeXmath. Note:adrawbackofthisextensionisthatitprecludes
escaping(and[.
Extension:tex_math_double_backslash
Causesanythingbetween\\(and\\)tobeinterpretedasinlineTeXmath,andanythingbetween\\[
and\\]tobeinterpretedasdisplayTeXmath.
Extension:markdown_attribute
Bydefault,pandocinterpretsmaterialinsideblock-leveltagsasMarkdown. Thisextensionchanges
the behaviorsothat Markdownisonly parsedinsideblock-leveltagsif thetagshavetheattribute
markdown=1.
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PandocUser’sGuide
Pandoc’sMarkdown
Extension:mmd_title_block
EnablesaMultiMarkdownstyletitleblockatthetopofthedocument,forexample:
Title:
My title
Author: John Doe
Date:
September 1, 2008
Comment: This is a sample mmd title block, with
a field spanning multiple lines.
SeetheMultiMarkdowndocumentationfordetails.Ifpandoc_title_blockoryaml_metadata_block
isenabled,itwilltakeprecedenceovermmd_title_block.
Extension:abbreviations
ParsesPHPMarkdownExtraabbreviationkeys,like
*[HTML]: Hypertext Markup Language
Notethatthepandocdocumentmodeldoesnotsupportabbreviations,soifthisextensionisenabled,
abbreviationkeysaresimplyskipped(asopposedtobeingparsedasparagraphs).
Extension:autolink_bare_uris
MakesallabsoluteURIsintolinks,evenwhennotsurroundedbypointybraces<...>.
Extension:ascii_identifiers
Causestheidentifiersproducedbyauto_identifierstobepureASCII.Accentsarestrippedoffof
accentedlatinletters,andnon-latinlettersareomitted.
Extension:mmd_link_attributes
Parsesmultimarkdownstylekey-valueattributesonlinkandimagereferences. Thisextensionshould
notbeconfusedwiththelink_attributesextension.
This is a reference ![image][ref] with multimarkdown attributes.
[ref]: http://path.to/image "Image title" width=20px height=30px
id=myId class="myClass1 myClass2"
Extension:mmd_header_identifiers
Parsesmultimarkdownstyleheaderidentifiers(insquarebrackets,aftertheheaderbutbeforeanytrail-
ing#sinanATXheader).
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PandocUser’sGuide
Pandoc’sMarkdown
Extension:compact_definition_lists
Activatesthedefinitionlistsyntaxofpandoc1.12.xandearlier. Thissyntaxdiffersfromtheonede-
scribedaboveunderDefinitionlistsinseveralrespects:
• Noblanklineisrequiredbetweenconsecutiveitemsofthedefinitionlist.
• Togeta“tight”or“compact”list,omitspacebetweenconsecutiveitems;thespacebetweena
termanditsdefinitiondoesnotaffectanything.
• Lazywrappingofparagraphsisnotallowed:theentiredefinitionmustbeindentedfourspaces.
6
Markdownvariants
Inadditiontopandoc’sextendedMarkdown,thefollowingMarkdownvariantsaresupported:
markdown_phpextra(PHPMarkdownExtra) footnotes,pipe_tables,raw_html,markdown_attribute,
fenced_code_blocks, definition_lists, intraword_underscores, header_attributes,
link_attributes,abbreviations,shortcut_reference_links.
markdown_github(GitHub-FlavoredMarkdown) pipe_tables,raw_html,fenced_code_blocks,
auto_identifiers, ascii_identifiers, backtick_code_blocks, autolink_bare_uris,
intraword_underscores,strikeout,hard_line_breaks,emoji,shortcut_reference_links.
markdown_mmd(MultiMarkdown) pipe_tables,raw_html,markdown_attribute,mmd_link_attributes,
raw_tex,
tex_math_double_backslash,
intraword_underscores,
mmd_title_block,
footnotes, definition_lists, all_symbols_escapable, implicit_header_references,
auto_identifiers,mmd_header_identifiers,shortcut_reference_links.
markdown_strict(Markdown.pl) raw_html
ExtensionswithformatsotherthanMarkdown
SomeoftheextensionsdiscussedabovecanbeusedwithformatsotherthanMarkdown:
• auto_identifierscanbeusedwithlatex,rst,mediawiki,andtextileinput(andisusedby
default).
• tex_math_dollars,tex_math_single_backslash,andtex_math_double_backslashcanbe
usedwithhtmlinput.(ThisishandyforreadingwebpagesformattedusingMathJax,forexam-
ple.)
6
Toseewhylazinessisincompatiblewithrelaxingtherequirementofablanklinebetweenitems,considerthefollowing
example:
bar
:
definition
foo
:
definition
Isthisasinglelistitemwithtwodefinitionsof“bar,”thefirstofwhichislazilywrapped,ortwolistitems?Toremovethe
ambiguitywemusteitherdisallowlazywrappingorrequireablanklinebetweenlistitems.
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PandocUser’sGuide
Producingslideshowswithpandoc
Producingslideshowswithpandoc
YoucanusepandoctoproduceanHTML+javascriptslidepresentationthatcanbeviewedviaaweb
browser. Therearefivewaystodothis,usingS5,DZSlides,Slidy,Slideous,orreveal.js. Youcanalso
produceaPDFslideshowusingLaTeXbeamer.
Here’stheMarkdownsourceforasimpleslideshow,habits.txt:
% Habits
% John Doe
% March 22, 2005
# In the morning
## Getting up
- Turn off alarm
- Get out of bed
## Breakfast
- Eat eggs
- Drink coffee
# In the evening
## Dinner
- Eat spaghetti
- Drink wine
------------------
![picture of spaghetti](images/spaghetti.jpg)
## Going to sleep
- Get in bed
- Count sheep
ToproduceanHTML/javascriptslideshow,simplytype
pandoc -t FORMAT -s habits.txt -o habits.html
whereFORMATiseithers5,slidy,slideous,dzslides,orrevealjs.
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PandocUser’sGuide
Producingslideshowswithpandoc
For Slidy, Slideous, reveal.js, and S5, the file produced by pandocwiththe -s/--standaloneop-
tionembedsalinktojavascriptsand CSS files, whichareassumed tobe available at the relative
paths5/default(forS5),slideous(for Slideous),reveal.js(forreveal.js), or at theSlidyweb-
site atw3.org(for Slidy). (These pathscanbe changed by settingtheslidy-url,slideous-url,
revealjs-url,or s5-url variables; see Variablesforslides,above.) ) For r DZSlides, , the(relatively
short)javascriptandcssareincludedinthefilebydefault.
WithallHTMLslideformats,the--self-containedoptioncanbeusedtoproduceasinglefilethat
containsallofthedatanecessarytodisplaytheslideshow,includinglinkedscripts,stylesheets,images,
andvideos.
ToproduceaPDFslideshowusingbeamer,type
pandoc -t beamer habits.txt -o habits.pdf
Notethatareveal.jsslideshowcanalsobeconvertedtoaPDFbyprintingittoafilefromthebrowser.
Structuringtheslideshow
Bydefault,theslidelevelisthehighestheaderlevelinthehierarchythatisfollowedimmediatelyby
content,andnotanotherheader,somewhereinthedocument. Intheexampleabove,level1headers
arealwaysfollowedbylevel2headers,whicharefollowedbycontent,so2istheslidelevel.Thisdefault
canbeoverriddenusingthe--slide-leveloption.
Thedocumentiscarvedupintoslidesaccordingtothefollowingrules:
• Ahorizontalrulealwaysstartsanewslide.
• Aheaderattheslidelevelalwaysstartsanewslide.
• Headersbelow theslidelevelinthehierarchycreateheaderswithinaslide.
• Headersabovetheslidelevelinthehierarchycreate“titleslides,”whichjustcontainthesection
titleandhelptobreaktheslideshowintosections.
• Atitlepageisconstructedautomaticallyfromthedocument’stitleblock,ifpresent.(Inthecase
ofbeamer,thiscanbedisabledbycommentingoutsomelinesinthedefaulttemplate.)
Theserulesaredesignedtosupportmanydifferentstylesofslideshow. Ifyoudon’tcareaboutstruc-
turingyourslidesintosectionsandsubsections,youcanjustuselevel1headersforalleachslide. (In
thatcase,level1willbetheslidelevel.)Butyoucanalsostructuretheslideshowintosections,asinthe
exampleabove.
Note:inreveal.jsslideshows,ifslidelevelis2,atwo-dimensionallayoutwillbeproduced,withlevel
1headersbuildinghorizontallyandlevel2headersbuildingvertically.Itisnotrecommendedthatyou
usedeepernestingofsectionlevelswithreveal.js.
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PandocUser’sGuide
Producingslideshowswithpandoc
Incrementallists
Bydefault,thesewritersproduceliststhatdisplay“allatonce.” Ifyouwantyourliststodisplayincre-
mentally(oneitematatime),usethe-ioption.Ifyouwantaparticularlisttodepartfromthedefault
(thatis,todisplayincrementallywithoutthe-ioptionandallatoncewiththe-ioption),putitina
blockquote:
> - Eat spaghetti
> - Drink wine
Inthiswayincrementalandnonincrementallistscanbemixedinasingledocument.
Insertingpauses
Youcanadd“pauses”withinaslidebyincludingaparagraphcontainingthreedots,separatedbyspaces:
# Slide with a pause
content before the pause
. . .
content after the pause
Stylingtheslides
YoucanchangethestyleofHTMLslidesbyputtingcustomizedCSSfilesin$DATADIR/s5/default(for
S5),$DATADIR/slidy(forSlidy),or$DATADIR/slideous(forSlideous),where$DATADIRistheuser
datadirectory(see--data-dir,above).Theoriginalsmaybefoundinpandoc’ssystemdatadirectory
(generally$CABALDIR/pandoc-VERSION/s5/default). Pandocwilllookthereforanyfilesitdoesnot
findintheuserdatadirectory.
Fordzslides,theCSSisincludedintheHTMLfileitself,andmaybemodifiedthere.
Allreveal.jsconfigurationoptionscanbesetthroughvariables. Forexample,themescanbeusedby
settingthethemevariable:
-V theme=moon
Oryoucanspecifyacustomstylesheetusingthe--cssoption.
Tostylebeamerslides,youcanspecifyatheme,colortheme,fonttheme,innertheme,andoutertheme,
usingthe-Voption:
pandoc -t beamer habits.txt -V theme:Warsaw -o habits.pdf
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